Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAAATGAGCCAGGTA
(((((((.((...((((((...&))))))..)).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020754
GeneSymbolARHGAP31
Binding site8487,8506
Score0.885
Seed1
Au0.574
Energy-19.1
Binding len19
Me-13.712
Phylopstem0.2358974285714286
Phylopflank0.1760603415
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure