Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTACTGTGGCTGCT
..(((((((((((.(.(((((&)))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020759
GeneSymbolSTARD9
Binding site9238,9257
Score0.904
Seed1
Au0.456
Energy-23.8
Binding len19
Me-6.047
Phylopstem-0.5230783090909091
Phylopflank0.0003432962500000171
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure