Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGGACCCACAAGGCTGCT
..((((((..((((.((((((&)))))).)))).....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020759
GeneSymbolSTARD9
Binding site3093,3116
Score0.923
Seed1
Au0.471
Energy-23.1
Binding len23
Me-7.991
Phylopstem0.21725180000000002
Phylopflank0.15876645750000004
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure