Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTGCCTGCATGGTGTGCACCATAGGTT
(((((((((((.((((((....&.)))))).))))))....))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020760
GeneSymbolHECW2
Binding site5765,5794
Score0.923
Seed1
Au0.529
Energy-19.2
Binding len24
Me-7.284
Phylopstem0.9103733333333334
Phylopflank2.0046029187500003
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end4
Position3UTR
2D Structure