Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGCAGCCGTGAGCTGCAT
.(((((((((((((((..(((&)))...)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020760
GeneSymbolHECW2
Binding site30,53
Score0.846
Seed1
Au0.191
Energy-27.6
Binding len23
Me-3.793
Phylopstem0.05345778750000002
Phylopflank0.24766196403846152
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
Position5UTR
2D Structure