Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGGCCGCCTGCTGTAC
.((((((.((((((((..(((&)))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020761
GeneSymbolRPTOR
Binding site4822,4842
Score0.846
Seed1
Au0.294
Energy-23.4
Binding len20
Me-6.107
Phylopstem0.21947737500000006
Phylopflank1.6152577409999997
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure