Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGGGCTGCTGCTGCAT
.((((((.(((((..((((((&)))))).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020762
GeneSymbolSRGAP1
Binding site17479,17499
Score0.846
Seed1
Au0.515
Energy-22.3
Binding len20
Me-7.699
Phylopstem-0.12079398333333334
Phylopflank0.09527703750000002
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure