Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACCCCGCAGCTGCT
..((((((((((..((..(((&))).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020764
GeneSymbolCASKIN1
Binding site2587,2605
Score1.0
Seed1
Au0.279
Energy-23.6
Binding len18
Me-7.103
Phylopstem0.28825900000000015
Phylopflank1.5126255062499996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure