Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACACAGCAGCTGCGGCGGCGAA
((((.(((((((((((..(((&))).....))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020765
GeneSymbolUBR4
Binding site15572,15597
Score0.949
Seed0
Au0.353
Energy-23.7
Binding len25
Me-8.057
Phylopstem4.426568363636362
Phylopflank5.4266312774999985
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure