Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAGCTGCATGAAATTCCCAGTCTGCAGT
(((((((((((((((((((((&))))))))))))))...........).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020765
GeneSymbolUBR4
Binding site3342,3376
Score1.0
Seed1
Au0.471
Energy-23.5
Binding len34
Me-3.938
Phylopstem5.164233833333333
Phylopflank5.105813937500001
Longest consecutive pairings14
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure