Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGCCAGGTG
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020766
GeneSymbolPCDH19
Binding site1162,1172
Score1.0
Seed1
Au0.338
Energy-15.9
Binding len10
Me-14.466
Phylopstem1.843032088888889
Phylopflank2.0188681300000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure