Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAACTGCAGAATTGCT
..((((((((((((((.((((&))))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020766
GeneSymbolPCDH19
Binding site3809,3830
Score1.0
Seed1
Au0.559
Energy-23.0
Binding len21
Me-4.957
Phylopstem1.1564095625000002
Phylopflank1.0297002275000002
Longest consecutive pairings14
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure