Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAATTGCTTGCTGTG
..(((((.((((((((.((((&))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020768
GeneSymbolKCTD16
Binding site10206,10226
Score0.923
Seed0
Au0.485
Energy-21.3
Binding len20
Me-7.271
Phylopstem-0.314413375
Phylopflank-0.2707669825
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure