Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCGACTGCAGGGGCT
..((..((((((((((..(((&)))..))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020770
GeneSymbolCGN
Binding site2960,2980
Score0.846
Seed0
Au0.412
Energy-22.7
Binding len20
Me-10.977
Phylopstem2.5946475999999996
Phylopflank2.6429071937499997
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure