Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAATCGCTGCTGTG
..(((((.(((((((((((((&))))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020771
GeneSymbolHACE1
Binding site2846,2866
Score0.833
Seed0
Au0.588
Energy-26.4
Binding len20
Me-7.271
Phylopstem4.78188423076923
Phylopflank5.482022387500001
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure