Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAAGTCATATTGCTTAGCTTGTTAATAATGATTCTGCATGTGTGCTGGGTT
(((((((((((.(((((((.((&.)).)))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020774
GeneSymbolMIB1
Binding site8658,8709
Score1.0
Seed1
Au0.647
Energy-24.3
Binding len23
Me-7.284
Phylopstem0.16689877272727272
Phylopflank0.5377482675000002
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure