Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACCAAGTGTGCCAGGG
.((((((((((...((......&))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020778
GeneSymbolALPK3
Binding site8932,8948
Score1.0
Seed1
Au0.368
Energy-18.8
Binding len16
Me-9.286
Phylopstem-0.1370709
Phylopflank-0.12689762037499996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure