Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGGTGCATGCCAGGG
.((((((((.(.((.(((....&))).))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020778
GeneSymbolALPK3
Binding site10001,10018
Score0.846
Seed1
Au0.471
Energy-18.3
Binding len17
Me-9.118
Phylopstem0.36082074999999997
Phylopflank0.40058888499999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure