Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGGGGCCCAGCTGCAGC
(((((((((.((((.(((((.&))))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020778
GeneSymbolALPK3
Binding site5913,5933
Score0.846
Seed1
Au0.324
Energy-25.9
Binding len20
Me-5.916
Phylopstem-0.1959377
Phylopflank-0.41280445625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure