Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCCACACACTGCAGCTGTAC
.(((((((((((((((..(((&)))...))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020778
GeneSymbolALPK3
Binding site494,517
Score0.885
Seed1
Au0.456
Energy-24.7
Binding len23
Me-3.793
Phylopstem4.416589812500001
Phylopflank4.8179785525
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure