Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTTAGATTAAAGCTGCAC
.(((((((..((((...((((&))))....))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020783
GeneSymbolSYT4
Binding site2744,2766
Score0.846
Seed1
Au0.662
Energy-17.8
Binding len22
Me-7.061
Phylopstem5.843007428571427
Phylopflank4.67793465375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure