Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCATTCAGGTGGCCAAGTA
((.((((.((((((((((((((&)))))))))))...))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020784
GeneSymbolTXNDC16
Binding site2452,2477
Score0.846
Seed0
Au0.588
Energy-18.6
Binding len25
Me-7.809
Phylopstem1.7745328294117646
Phylopflank1.5378733749999998
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure