Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGTGAGGTGAGGACCTGGTGGCCGCAGTTGTG
..(((((((((((((..((((&.))))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020786
GeneSymbolPDP2
Binding site29,66
Score0.846
Seed1
Au0.309
Energy-25.4
Binding len21
Me-5.19
Phylopstem-0.07442913076923079
Phylopflank-0.13110969875000003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure