Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGGCTGCTGGCCACCCAGCCTGATGATGCCGGCTGCT
..((((((((((((((.((((&)))))))))))).......................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020789
GeneSymbolIGSF9
Binding site1068,1110
Score0.846
Seed1
Au0.338
Energy-22.3
Binding len42
Me-4.957
Phylopstem0.7876250594594592
Phylopflank1.7771267675
Longest consecutive pairings12
Position of longest consecutive pairings30
Pairings in 3prime end7
PositionCDS
2D Structure