Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATATATGAGCCTATTAGGAGCTGCAGG
((((((((.((((((((((((&)))))))).....))).....).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020791
GeneSymbolTAOK1
Binding site10794,10826
Score1.0
Seed1
Au0.588
Energy-21.9
Binding len32
Me-4.994
Phylopstem0.9696400772727274
Phylopflank1.16010353875
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end8
Position3UTR
2D Structure