Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCCGCGGCAGCC
..((.((((((((((...(((&))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020796
GeneSymbolSEMA6A
Binding site2983,3000
Score0.846
Seed0
Au0.338
Energy-22.5
Binding len17
Me-9.309
Phylopstem1.7644575
Phylopflank1.0534981074999998
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure