Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATAACAGCATCCCTGGGTCTGCAGT
((((((((((.((((((((((&)))))))))).))).......).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020796
GeneSymbolSEMA6A
Binding site1627,1657
Score0.846
Seed1
Au0.529
Energy-20.6
Binding len30
Me-6.762
Phylopstem1.8056309
Phylopflank1.6764171937499999
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure