Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATGACCAAGCTGCAGT
((((((((..((((((.(((.&))).)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020798
GeneSymbolUSP35
Binding site1685,1705
Score0.846
Seed1
Au0.456
Energy-21.9
Binding len20
Me-6.236
Phylopstem4.878038625
Phylopflank3.7141433824999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure