Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAACGCCAGCTGCT
..(((((((..((..((((((&))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020799
GeneSymbolSTAMBPL1
Binding site1188,1206
Score0.846
Seed1
Au0.515
Energy-20.7
Binding len18
Me-10.617
Phylopstem2.8484258571428573
Phylopflank2.2515713587500006
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure