Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTCACAGAAACAGAAAGGAGAATAGTGGTTGCCAGGG
.(((((((..((.(((......&.))).))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020800
GeneSymbolIFT80
Binding site3166,3206
Score0.923
Seed1
Au0.456
Energy-17.9
Binding len17
Me-7.381
Phylopstem3.498805428571429
Phylopflank4.217546525375001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure