Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTACGGCCGCCCACTGTAC
.(((((..((((((((((...&))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020800
GeneSymbolIFT80
Binding site776,795
Score0.846
Seed0
Au0.559
Energy-19.4
Binding len19
Me-7.651
Phylopstem-0.60313564
Phylopflank0.21750422749999998
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure