Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCTATGGCAGTTGCT
..((((((((.((.(((....&))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020800
GeneSymbolIFT80
Binding site1988,2004
Score0.923
Seed1
Au0.544
Energy-18.7
Binding len16
Me-8.639
Phylopstem3.06417525
Phylopflank4.3698818500000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure