Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTAACCGCAGCTCCGCAC
.((((((((((((((..((((&))))..)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020804
GeneSymbolPACSIN1
Binding site210,233
Score0.846
Seed1
Au0.368
Energy-26.0
Binding len23
Me-4.026
Phylopstem0.46327168124999996
Phylopflank2.27979961625
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure