Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGGACCGCAGATGCC
..(((.((((((((...((((&))))...)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020804
GeneSymbolPACSIN1
Binding site3118,3138
Score0.846
Seed0
Au0.353
Energy-22.8
Binding len20
Me-7.826
Phylopstem0.07585027499999998
Phylopflank-0.39194255300000014
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure