Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGACAGCTCAGCTGCGGA
(((((((((.((((((..(((&)))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020808
GeneSymbolSIPA1L2
Binding site5686,5708
Score1.0
Seed1
Au0.456
Energy-23.8
Binding len22
Me-5.18
Phylopstem4.407629888888889
Phylopflank3.3704392824999996
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure