Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGACCGGAAGCTGCC
..((((((.((((((.((((.&))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020808
GeneSymbolSIPA1L2
Binding site3905,3924
Score0.923
Seed1
Au0.382
Energy-24.0
Binding len19
Me-6.246
Phylopstem5.250645166666666
Phylopflank4.834812591928751
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure