Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAGCCCAGCCGCCTGGCTGCAGC
(((((((((((((((...(((&.))))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020809
GeneSymbolARHGAP20
Binding site1208,1235
Score0.846
Seed1
Au0.426
Energy-25.1
Binding len22
Me-4.171
Phylopstem0.34527959882352943
Phylopflank0.11511792812499994
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure