Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCCAGGAGGCTGGCAAG
((((((((..(((((.(((((&))))))))))....))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020813
GeneSymbolZNF471
Binding site2107,2131
Score0.923
Seed1
Au0.515
Energy-20.7
Binding len24
Me-6.47
Phylopstem-0.00394193333333332
Phylopflank0.16975134500000005
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure