Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATTACAGCCACAGTGACCTTTCAAAAATGCAAA
(((((((((.((((((((.((&)).)))))))).)))).............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020813
GeneSymbolZNF471
Binding site4238,4273
Score0.923
Seed1
Au0.706
Energy-19.0
Binding len35
Me-5.18
Phylopstem0.17615726818181818
Phylopflank-0.09289639749999999
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end7
Position3UTR
2D Structure