Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCGCAGCAGCAGCTGCGGG
((((((((((.(((((..(((&)))...))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020814
GeneSymbolMARCHF4
Binding site991,1014
Score0.846
Seed1
Au0.206
Energy-27.0
Binding len23
Me-6.762
Phylopstem-0.40650320000000006
Phylopflank-0.13640030249999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure