Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGGCAACTGCACCGAGCCCGTGGAACATGCTGCAGT
((((((((((((((((..(((&)))...))))))))).................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020818
GeneSymbolUNC79
Binding site2928,2968
Score0.846
Seed1
Au0.515
Energy-22.6
Binding len40
Me-3.938
Phylopstem2.146909287878788
Phylopflank3.645500525
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end6
PositionCDS
2D Structure