Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGGCAGCAGCCATGGGGA
((.((((((((.(((((((((&))))))))).).)))))..)).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330440
GeneSymbolSMARCD2
Binding site29,54
Score0.846
Seed0
Au0.324
Energy-22.4
Binding len25
Me-8.842
Phylopstem1.7367113888888888
Phylopflank1.297929904934211
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end8
Position5UTR
2D Structure