Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACCAGCTGCAGG
((((((((..((((((.....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330440
GeneSymbolSMARCD2
Binding site924,939
Score0.974
Seed1
Au0.426
Energy-19.6
Binding len15
Me-6.236
Phylopstem4.2140551
Phylopflank4.2229156762499995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure