Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAACTAATAAGTAGCCGAACATTGAAGCTGCAC
.(((((((..(((((((((((&)))))))))))....................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020819
GeneSymbolFAM135A
Binding site583,622
Score0.923
Seed1
Au0.529
Energy-23.6
Binding len39
Me-6.092
Phylopstem5.302782363636363
Phylopflank4.43818474
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end8
PositionCDS
2D Structure