Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAGCTGCAGCTGCGC
.(((((((((((((.(.....&).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020820
GeneSymbolPREX1
Binding site4089,4105
Score1.0
Seed1
Au0.368
Energy-23.6
Binding len16
Me-4.529
Phylopstem2.0326272107692307
Phylopflank3.145403093
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure