Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAGGTGTGTGCCACCACGCCTGGGTA
((((((((((((.(((((....&)))))..))))))))).........))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020821
GeneSymbolVPS13C
Binding site11869,11898
Score0.846
Seed1
Au0.618
Energy-17.8
Binding len29
Me-5.227
Phylopstem2.699648
Phylopflank3.36445057375
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end4
Position3UTR
2D Structure