Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGACACCGCAGCC
.....(((((((.(((..(((&)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020824
GeneSymbolARHGAP21
Binding site2939,2955
Score1.0
Seed0
Au0.485
Energy-20.6
Binding len16
Me-14.955
Phylopstem4.833892142857143
Phylopflank4.852402818750001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure