Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAG
(((((((((.((((((((((.&)))))))))).)..............................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365836
GeneSymbolPPP6R2
Binding site4057,4108
Score0.923
Seed1
Au0.485
Energy-22.2
Binding len51
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings41
Pairings in 3prime end7
Position3UTR
2D Structure