Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACGACCTGCTGCAGG
(((((((...((((((.((((&)))).)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020826
GeneSymbolSYT13
Binding site1225,1245
Score0.846
Seed1
Au0.412
Energy-23.5
Binding len20
Me-8.55
Phylopstem0.6992978571428571
Phylopflank-0.26917128125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure