Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCAGACAGCCCTAAAGAAGCGGCAGCTGCAC
.(((((((((((((((..(((&)))...))))))...........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020826
GeneSymbolSYT13
Binding site755,788
Score0.923
Seed1
Au0.338
Energy-23.1
Binding len33
Me-3.793
Phylopstem-0.5629906715384615
Phylopflank-0.0002608610000000705
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure